empress
empress copied to clipboard
biocore
A fast and scalable phylogenetic tree viewer for microbiome data analysis
This PR attempts to address #491. The goal of this pr is not necessarily to review the code but to test the basic concept to better improve the interface/way users...
We repeat this paradigm a lot in `empress.js` (five times just using `this._featureMetadataColumns`, by my count, and I'm pretty sure most of these are my fault :P): ```js var fmIdx...
Hi team, I found myself recently needing to investigate the phylogenetic distance between 2 specific ASVs and thought it might be really useful if Empress could visually highlight the full...
### Steps to reproduce 1. Start some sort of event in Emperor that only lasts for a specific duration (e.g. using the mouse to draw a box that selects a...
ID column only containing integers causes the dataframe index to be int type which causes the index.intersection code to fail in tool.py: ...
It was brought up that some journals put restrictions on legend size. So, it would be nice to also allow legend text to continue on a new line. We can...
This isn't really a bug, but I think some users might get annoyed by this. The changes I added in #512 automatically resize the tree coloring legend whenever sample/feature metadata...
This is a small weird problem that nonetheless makes the UI look weird:  The problem is caused by setting the barplots to something invalid (e.g. trying to use continuous...
Small bug introduced by the changes in #505. As a part of this PR, the sample and feature metadata tree coloring tabs are disabled during EMPress / EMPeror animations and...
Hi empress developer, Can I set the min and max value of the colorbar when I add a layer of boxplot? and how? For example, I'd like to set the...
