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YuLab-SMU
:christmas_tree:Visualization and annotation of phylogenetic trees
I posted this on biostars but I am not sure if it is a feature request or it is already possible. In ggtree you can add images to tips as...
Hi there! Thanks for creating such a great package, it's been invaluable to my work. I'm having a problem when trying to use custom tip labels (see reprex below). `plot2`...
Hi, I met the error when I am running the ggtree attached below; Error in `vec_as_location()`: ! `...` must be empty. ✖ Problematic argument: • call = call Backtrace: 1....
I tried to install the ggtree by this code: BiocManager::install("ggtree") However, it showed me the error like this: 'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details replacement repositories: CRAN:...
Hello! My name is Amanda and I'm a PhD Student. I'm trying to install ggtree in RStudio Desktop 2022.07.1+554 with R 4.2.1 and I get an error. My computer is...
gheatmap supports family, and other edits of the colnames, but does not support fontface. **Any chance fontface="italic" could be added?** _Originally posted by @Espinosa-Gongora in https://github.com/YuLab-SMU/ggtree/issues/367#issuecomment-1085961370_
Hi Dr. Yu, First, thank your for the ggtree package. I was wondering if you could help with this issue: can ggtree could produce a fan-shaped phylogeny with time scale...
Perhaps it's just temporary, but https://yulab-smu.top/treedata-book/ seems to be down?
Hello Prof. Yu, Do you perhaps know how I can colour each column in the heatmap alongside a phylogeny individually? I've got a binary dataset, and I can get it...
Hello I have a big tree (n=29k tips) from which I would like to highlight some clades I defined those clades in the meta which looks like that:  ```...
