ggtree
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YuLab-SMU
:christmas_tree:Visualization and annotation of phylogenetic trees
I am having issues labeling a paraphyletic clade using geom_strip. I want to have the label of the clade rotate with the position of the strip, as is possible in...
### Prerequisites + [x] Have you read [Feedback](https://guangchuangyu.github.io/ggtree/#feedback) and follow the [guide](https://guangchuangyu.github.io/2016/07/how-to-bug-author/)? * [x] make sure you are using the latest release version * [x] read the [documents](https://yulab-smu.github.io/treedata-book/) * [x]...
Hi there, We've been preparing a new major release for ggplot2 and found an issue during a reverse dependency check. The issue is due to accessing ggplot2 internals that aren't...
Hi, I have a ggtree tree object and I want to explore them in a RShiny app. My ggtree is not compatible with plotly plot (I losted highlight, clade, ..)....
Thanks for maintaining this package. It would be great if the README documented how to install it.
For some trees, the geome_tiplab angle in "fan" layout may be a little wrong. (as "fan" layout is important for open_angle) Test code: ```r tr1
Hello, I'm not sure if this is an issue for the treeio package or ggtree, but the geom_rootedge breaks when branch.lengths are 'none' and the input tree is a treedata...
Hello, I am running into an issue where, when geom_tiplab is used in conjunction with scaleClade, the tip labels are rendering at the angle they would be if they were...
I am new to R. I was trying to install ggtree in R but i am continuously getting the following error Installation paths not writeable, unable to update packages path:...
Hey Everyone, I really love the way that ggtree can make trees look, but I am really struggling to try and reroot trees in a way that stays true to...
