James Ferguson
James Ferguson
Hey, Ahh that message was left as a land mine. This was a field that pod5 has but wasn't using. I put that message in to detect if they started...
Does the conversion actually finish or does it crash with that error? It's midnight here, so I'll fix it tomorrow. I imagine data we produced today should also have this...
Yea we use it on all of our data But could be because we use older versions of minknow that we haven't hit the new metadata field. I'll fix this...
Hey, Could you try the latest release, v0.1.1? Cheers, James
Which version of pod5 are you using? Make sure it's the latest with the latest numpy 2.0.0. there were some updates recently based on the new numpy release. Maybe try...
I would advise you create a separate environment for blue crab. Using python3 -m venv ./blue-crab source blue-crab/bin/activate Then update pip and install the latest release by cloning the repository,...
Could you post the results of. pip list James
Hmmm yea okay. You might need to downgrade pod5 to the previous version along with a numpy downgrade of 1.* Rather than 2.* Let me know if you want some...
Hey, Thanks so much for flagging this. I'll push through a patch. This stuff happens all the time with ONT, so I'm not even a little bit surprised. I'll leave...
Hello, This should now be resolved in https://github.com/Psy-Fer/buttery-eel/releases/tag/v0.5.0 Cheers James