Taylor Salo

Add `nimads` module with implementations of NIMADS objects

3

This will probably never be merged, so I will say that it references #218 instead of closes it. I just wanted to put together a skeleton of the `nimads` module,...

Enhance/refactor workflow-generated boilerplates

2

## Summary The command-line interfaces in the `workflows` module generate methods descriptions that can be pasted directly into manuscripts. Currently, those boilerplates are just multiline strings. I'd like to improve...

Add documentation section on contributing new methods

2

## Summary One thing NiMARE is meant to be is a central location for meta-analytic algorithms. Folks who produce new methods (e.g., in graduate school) should be able to add...

## Summary Some of the fetching tests regularly fail because we're sending out too many requests too quickly. We can reduce the number of requests by only testing the oldest...

Create documentation for teaching users

1

## Summary During yesterday's Neurostore devs call, we talked a bit about the NiMARE documentation. Currently, there is a mix of methods descriptions (the [NiMARE Methods](https://nimare.readthedocs.io/en/latest/methods.html) page) and [examples](https://nimare.readthedocs.io/en/latest/auto_examples/index.html) of...

Implement Analysis of Brain Coordinates CBMA algorithm

2

Analysis of Brain Coordinates (ABC) is a new CBMA algorithm proposed in [Tench et al. (2022)](https://doi.org/10.1016/j.jneumeth.2022.109556). Replication data are available at https://rdmc.nottingham.ac.uk/handle/internal/9171 and https://rdmc.nottingham.ac.uk/handle/internal/9121. I'll try to describe the method...

## Summary Neurostore will generate JSON files specifying the steps of a meta-analysis. We will need an interface in NiMARE to translate the JSON file to a script using NiMARE...

Allow study-level data access at contrast level

1

Add `levels` argument to `Dataset._load_data`, in order to load data from the study level when appropriate (e.g., for metadata and texts, but not for images). Metadata (and texts, to some...

## Summary We have a few educational resources from OHBM and NeuroHackademy that aren't referenced on the documentation site. ## Next steps 1. Hunt down any resources/tutorials we've done and...

Add DatasetSearcher class with search methods from Dataset

1

Closes #669. Changes proposed in this pull request: - Create a `nimare.dataset.DatasetSearcher` class with all of the `get` methods originally in the `Dataset` class. - Move several functions around to...