Taylor Salo
Taylor Salo
## Summary Some modules are not as crucial for NiMARE's core functionality (i.e., meta-analysis), such as `annotate`, `decode`, and `extract`. This is a proposal we've been talking about in this...
## Summary Datasets currently store annotations as an attribute `.annotations`, which is a pandas DataFrame with one column for each label. Groups of annotations (e.g., Neurosynth TF-IDF values vs. LDA...
## Summary Our current naming conventions for (1) downloaded NeuroVault files, (2) maps generated with `ImageTransformer`, (3) meta-analysis outputs, and (4) maps generated with `KernelTransformer`s are all pretty different, and...
## Summary This stems from #639. When users use an incompatible combination of queries, the fetching functions should raise informative errors, such as a list of available patterns or even...
Add MAPBOT algorithm, as described in Yuan et al. (2017). ### References Yuan, Rui, et al. “MAPBOT: Meta-analytic parcellation based on text, and its application to the human thalamus.” NeuroImage...
Add MAMP algorithm, as described in Yang et al. (2016). ### References Yang, Yong, et al. “Identifying functional subdivisions in the human brain using meta-analytic activation modeling-based parcellation.” Neuroimage 124...
Add a novel image-based coactivation-based parcellation algorithm. The approach should be similar to coordinate-based CBP, but using statistical maps.
Add coactivation-based parcellation algorithm, as described in Bzdok et al. (2013). ### References Bzdok, D., Laird, A. R., Zilles, K., Fox, P. T., & Eickhoff, S. B. (2013). An investigation...
I've been talking with @jessicabartley about how to handle experiments with null findings in coordinate-based meta-analyses. There are two concerns: 1. NiMARE's coordinate storage (i.e., a DataFrame with one coordinate...
Add classifiers for predicting CogPO labels from text from the ATHENA project, as reported in Riedel et al. (2019). ### References Riedel, Michael Cody, et al. "Automated, efficient, and accelerated...