transposons topic

GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.

cgroza

rMETL - realignment-based Mobile Element insertion detection Tool for Long read

tjiangHIT

Annotation helper tool for the manual curation of transposable element consensus sequences

clemgoub

Genotyping of segregating mobile elements insertions

clemgoub

Transposon Insertion Finder - Detection of new TE insertions in NGS data

akiomiyao