taxonomic-profiling topic
List
taxonomic-profiling repositories
sourmash
441
Stars
76
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Quickly search, compare, and analyze genomic and metagenomic data sets.
kmcp
173
Stars
13
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Accurate metagenomic profiling && Fast large-scale sequence/genome searching
ampliseq
157
Stars
105
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Amplicon sequencing analysis workflow using DADA2 and QIIME2
taxprofiler
95
Stars
32
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Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
taxpasta
32
Stars
6
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TAXnomic Profile Aggregation and STAndardisation
Taxor
16
Stars
1
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Fast and space-efficient taxonomic classification of long reads