sequence-alignment topic
List
sequence-alignment repositories
vsearch
636
Stars
122
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Versatile open-source tool for microbiome analysis
minigraph
392
Stars
38
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Watchers
Sequence-to-graph mapper and graph generator
sequenceserver
267
Stars
114
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Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)
ksw2
124
Stars
24
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Global alignment and alignment extension
Arioc
53
Stars
8
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Arioc: GPU-accelerated DNA short-read alignment
kalign
116
Stars
28
Forks
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A fast multiple sequence alignment program.
unimap
85
Stars
4
Forks
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A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment
BioAlignments.jl
58
Stars
24
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Sequence alignment tools
biscuit
63
Stars
24
Forks
Watchers
BISulfite-seq CUI Toolkit
orthologr
84
Stars
27
Forks
Watchers
Genome wide orthology inference and dNdS estimation