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salmon repositories
salmon
739
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160
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🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
SalmonTE
79
Stars
23
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SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances
ostatus2
32
Stars
9
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A Ruby toolset for interacting with the OStatus suite of protocols
pisces
28
Stars
3
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PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.
fishpond
24
Stars
9
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Differential expression and allelic analysis, nonparametric statistics
spec
19
Stars
0
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OStatus Specification