reproducible-science topic
benchmark_VAE
Unifying Variational Autoencoder (VAE) implementations in Pytorch (NeurIPS 2022)
ten-simple-rules-dockerfiles
Ten Simple Rules for Writing Dockerfiles for Reproducible Data Science
reproducible-audio-research
List of Reproducible Audio Research Papers
pyseer
SEER, reimplemented in python 🐍🔮
single-cell-papers-with-code
Papers with code for single cell related papers
seamless
Seamless is a framework to set up reproducible computations (and visualizations) that respond to changes in cells. Cells contain the input data as well as the source code of the computations, and all...
MpGAP
Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads
ngs-preprocess
A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies
Better-Science-Code
A presentation on best coding/data management practices based on my own experiences of scientific computing and data analysis and heavily borrowing from the recommendations of many others. View presen...
CSV_Wrangling
Repository for reproducibility of the CSV file project