reproducible-science topic

List reproducible-science repositories

awesome-reproducible-research

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A curated list of reproducible research case studies, projects, tutorials, and media

singularity

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425
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Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.

sacred

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Sacred is a tool to help you configure, organize, log and reproduce experiments developed at IDSIA.

nextflow

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595
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A DSL for data-driven computational pipelines

itk-wasm

181
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48
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High performance spatial analysis in a web browser, Node.js, and across programming languages and hardware architectures

rrtools

665
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82
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rrtools: Tools for Writing Reproducible Research in R

reprozip

298
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33
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ReproZip is a tool that simplifies the process of creating reproducible experiments from command-line executions, a frequently-used common denominator in computational science.

liftr

169
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🐳 Containerize R Markdown documents for continuous reproducibility