pangenomics topic

An analysis and visualization platform for 'omics data

merenlab

Federating genomes with love (and synteny derived from functional annotations)

legumeinfo

Long-read aligner to pangenome graphs

at-cg

Panacus is a tool for computing statistics for GFA-formatted pangenome graphs

marschall-lab

Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México

vinuesa

Optimal sequence-to-graph alignment with recombinations

AlgoLab

AMR/VF LGT focused bacterial genomics analysis workflow

beiko-lab

An accurate aligner of long reads to a variation graph, based on co-linear chaining

algbio

GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.

marschall-lab

generating hardware accelerators for pangenomic graph queries

cucapra