antimicrobial-resistance topic

Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure

pha4ge

Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases.

phac-nml

Making whole bacterial genome sequencing data analysis easy

nmquijada

Harmonization of AMR predictor tool outputs

pha4ge

An R package identifying horizontal gene co-transfer between bacteria using association analysis and whole-genome sequences

wanyuac

HydrAMP: a deep generative model for antimicrobial peptide discovery

szczurek-lab

AMR/VF LGT focused bacterial genomics analysis workflow

beiko-lab

Code for the paper "Antimicrobial resistance prediction in clinical isolates through machine learning on MALDI-TOF mass spectra"

BorgwardtLab