nextflow topic
methylseq
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
nanoseq
Nanopore demultiplexing, QC and alignment pipeline
rnafusion
RNA-seq analysis pipeline for detection of gene-fusions
viralrecon
Assembly and intrahost/low-frequency variant calling for viral samples
eager
A fully reproducible and state-of-the-art ancient DNA analysis pipeline
dolphinnext
A graphical user interface for distributed data processing of high throughput genomics
configs
Config files used to define parameters specific to compute environments at different Institutions
What_the_Phage
WtP: Phage identification via nextflow and docker or singularity
CalliNGS-NF
GATK RNA-Seq Variant Calling in Nextflow