high-throughput-sequencing topic
List
high-throughput-sequencing repositories
hts-nim
153
Stars
26
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nim wrapper for htslib for parsing genomics data files
GEOparse
131
Stars
49
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Python library to access Gene Expression Omnibus Database (GEO)
varsim
78
Stars
31
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VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
BioAlignments.jl
58
Stars
24
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Sequence alignment tools
smashpp
56
Stars
12
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Find and visualize rearrangements in DNA sequences
fastq_utils
34
Stars
14
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Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
genoiser
15
Stars
0
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use the noise
bigwig-nim
16
Stars
2
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command-line querying+conversion of bigwigs and a nim wrapper for dpryan's libbigwig