de-novo-assembly topic

Long read production pipelines

broadinstitute

Compacted and colored de Bruijn graph construction and querying

algbio

BLEND is a mechanism that can efficiently find fuzzy seed matches between sequences to significantly improve the performance and accuracy while reducing the memory space usage of two important applica...

CMU-SAFARI

This is the codebase for Faucet, described in our manuscript: https://academic.oup.com/bioinformatics/article/34/1/147/4004871, by Roye Rozov, Gil Goldshlager, Eran Halperin, and Ron Shamir

Shamir-Lab