Steffen Neumann

Results 142 comments of Steffen Neumann

For those that already the `main.workflow`, here is how to convert to the new format: https://help.github.com/en/articles/migrating-github-actions-from-hcl-syntax-to-yaml-syntax Will report back whether `public_repo` once was sufficient once admitted to the public beta...

Hi, @AlasdairGray pointed me here, I posted the following to this morning to [email protected] but I think here could be a better place: Currently, we are including schema.org markup in...

Hi, I didn't have a proper solution, and manually converted the image following https://docs.openstack.org/image-guide/convert-images.html and manually uploaded to the images available. Yours, Steffen

This is not so much for workflow data, but in case I want to add some files to the cluster. Problem is that `kn kubectl create -f xxx.yml` does not...

@lgatto , what would you think ? That sounds like a filter that can be applied upon reading data in ?

Hi, I have very little hands-on experience running Obiwarp in xcms myself. Any chance you try single-threaded first ? Does it work to align just two files ? Can you...

ok, next wild guess. You've used the cool and current xcms3 interface. Let's try plain old xcms1. If that works, we'll have something to debug and fix. Instead of `readMSData()`...

Any chance of providing the slimmed mzMLs ? Ideally together with R script to reproduce. I can't promise timing, but I'd try to reproduce locally. Yours, Steffen

Hi, first I can confirm the `bad_array`. So the good news: it's not not you. Based on your R script in the google drive above, I poked around a bit....

Hi, I was able to reproduce the numbers in the example. I didn't find an explanation. Yours, Steffen