Steffen Neumann

Results 142 comments of Steffen Neumann

+1 from my side as well, it is quite confusing if your `docker build` succeeds, only to realise that the packages I want in there are, in fact, not in...

Hi, just weighing in here, indeed for e.g. NFS mounted home directories things are painfully slow. I'll happily trade speed for eye-candy. Yours, Steffen

Forgot to include some dmesg snippets: ``` ... [ 246.746417] WARNING: can't open objset 21, error 5 [ 348.241978] WARNING: can't open objset 21, error 5 [ 533.579410] WARNING: can't...

Another update: the pool also will not import if booting an Ubuntu 22.04 with the same error symptoms. If that helps anyone, I also dumped the ZDB and there are...

Hi, with some help I got further, here's what happened. These two completed without error: ``` zdb -m -e -U /dev/null three zdb -mm -e -U /dev/null three ``` while...

I'd be hesitant to commit manual work to that. We're in parallel lobbying to get also FAIRer software, where ideally we'd have automatic access to "last changed" information, which would...

So we need to deprecate these: `grep -l 10.1093/pcp/pcn183 MassBank-data/RIKEN_ReSpect/*` Just to confirm, this is about the 3604 records associated with the publication 10.1093/pcp/pcn183 marked as either "Build 4" or...

Hi @ynliu62 once you succeed, could you pass some stepwise instructions and screenshots that we can add to the user documentation ? Thanks, Steffen

If referencing one or more individual spectra in some repository, the PSI spectrum identifier could be used, which directly indexes individual scans in raw data: http://www.psidev.info/usi we need to find...

Sebastian's request was to be able to obtain the input spectrum/spectra used in a record prior to processing. And MetaboLights can (also) store vendor data, see [MTBLS297, Sciex](ftp://ftp.ebi.ac.uk/pub/databases/metabolights/studies/public/MTBLS297) [MTBLS2, Bruker](ftp://ftp.ebi.ac.uk/pub/databases/metabolights/studies/public/MTBLS2)...