Steffen Neumann
Steffen Neumann
Oh, and one more thing would help: after the error occurs please use `traceback()` for some idea where exactly the error occurs. Yours, Steffen
Hm, can't confirm yet here. We have an `add = TRUE` in the tests https://github.com/sneumann/xcms/blob/RELEASE_3_14/tests/testthat/test_methods-XCMSnExp.R#L1272 and that happily works here with `3.16.0`: http://bioconductor.org/checkResults/release/bioc-LATEST/xcms/ Could you run `R CMD check` on...
Can you do an `R CMD check xcms_3.16.0.tar.gz` ? The above output did not run yet the tests covering the `add = TRUE` thing we need. The warnings are not...
Great, exactly what we needed. So in general everything works because `√ Running 'testthat.R' (4m 23.4s)`. Next your script needs debugging, can you post a reproducible example that triggers the...
You're correct. Can you reproduce with this one: `msnfile
Can you check an EIC of the filled peak ? Which values are you using in the groupval, e.g. `into` ? Yours, Steffen
Indeed, all green again today. Yours, Steffen
While the issue was previously kinda self-healing, we have that again: ``` --- re-building ‘xcms-lcms-ms.Rmd’ using rmarkdown Sizes of mz and intensity arrays don't match. Quitting from lines 103-106 (xcms-lcms-ms.Rmd)...
Martin Morgan suggested: > Errors that are intermittent and platform-specific are often due to memory corruption, and can be investigated on Linux platforms with valgrind or similar tools. Have you...
Hi @jorainer, could you add instructions on your mostly reproducible example here, so that others on macOS can check if that also occurs on their setup ? I know @korseby...