Ryan Ly
Ryan Ly
Like for the validator, it would be nice to have the [best practices inspector](https://github.com/NeurodataWithoutBorders/nwbinspector ) installed when a user installs PyNWB. ## Checklist - [x] Have you ensured the feature...
If there is an error with reading or validating an NWB/HDMF file and the file is large (>1 GB), sharing that file is burdensome, and rarely is the error due...
`NWBContainer` and `DynamicTable` represents groups and `NWBData` represents datasets. The `_fieldsname` property differs between the three of them and is confusing and unintuitive. `NWBContainer._fieldsname` is `'__nwbfields__'` `DynamicTable._fieldsname` is `'__fields__'` `NWBData._fieldsname`...
## Motivation `tests/validation/test_validate.py` was not being called by any test scripts or CI. This PR adds `test_validate.py` to the `test.py` (under unit tests) and fixes it to work with the...
We recently updated HDMF with a number of infrastructure changes, e.g., CI, documentation. Many of these files are the same in PyNWB and should be updated here as well.
Is there support for in vitro extracellular ephys data in `.modat` files from the ALPHA MED Scientific [MED64 acquisition system](https://www.med64.com/products/med64-basic/)? If not, could it be added? I cannot find much...
### What would you like changed or added to the documentation and why? Until we make `load_namespaces=True` the default setting, all docs should demonstrate `load_namespaces=True` by default. I cannot see...
### What happened? The [read tutorial](https://pynwb.readthedocs.io/en/stable/tutorials/general/read_basics.html#sphx-glr-tutorials-general-read-basics-py) cannot be run without having first installed pynwb and matplotlib. ### Steps to Reproduce ```python Run the tutorial ``` ### Traceback _No response_ ###...
### What happened? @CBroz1 wrote: > I ran into a dependency conflict when working on the DLC2NWB DeepLabCut export. For Apple M1 machines, importing tensorflow requires numpy≥1.23, but pynwb 2.1...