Ryan Ly
Ryan Ly
Currently, for the `IntracellularElectrode` neurodata_type, the `initial_access_resistance` and `resistance` datasets are optional scalar text values. The doc key for `resistance` is 'Electrode resistance, in ohms.' Presumably, both of these datasets...
From https://nwb-schema.readthedocs.io/en/latest/format.html?highlight=intervalseries#intervalseries > Stores intervals of data. The timestamps field stores the beginning and end of intervals. The > data field stores whether the interval just started (>0 value) or...
### description The description of a `TimeSeries` is not required. If none is entered, the text "no description" is used. I think it is important for the user to provide...
A subject may be of a particular species but in markedly different lifestages (particularly for invertebrates) and so representing the lifestage would be useful. Values may be different larval stages,...
The "electrodes" table in `NWBFile` and the "bands" table in `DecompositionSeries` inherit from `DynamicTable` and add required datasets (columns) to them, but they themselves are not their own types. This...
See https://github.com/NeurodataWithoutBorders/pynwb/issues/954
In https://github.com/rly/ndx-pose/pull/9/, we would like to support the storage of single images both internally and externally. Only the `ImageSeries` type supports external image storage, but this is intended for images...
https://github.com/NeurodataWithoutBorders/nwb-schema/blob/19c4bbb36effb1454253072f70ebf2c83f2ea095/core/nwb.ophys.yaml#L335-L360 - xy translation is required but modern motion correction is often not a simple xy translation (e.g., NoRMCorre) - if a particular software package was used, we should store...
> Instead of going hierarchical & folder-y, another way I was thinking of was to tag these objects, which would be more powerful because certain time series or tables might...
@dsleiter brought up a good question. It is possible in HDF5 to create cycles, e.g., if a parent group had a child group and and that child group had a...