Ryan Ly

I accidentally updated the changelog in the nwb_schema_2.8.0 branch. I think we can move forward with this commit to that branch.

Also would be nice to print the expandable nwbfile in the read section.

Thanks for the bug report @johnmbarrett . We'll look into this. Please continue to use the choose a folder / popup file selector in the meantime.

This is ultimately a neuroconv issue. I can reproduce it using the latest neuroconv 0.7.5 on the gin miniscope test data. In the resulting NWB file, the ImageSeries at /acquisition/BehavCamImageSeries...

On further thought, I think an absolute file path is probably OK and makes sense, but I think the user should be informed about this hard linkage from the NWB...

I'm getting an error from neuroconv when getting the extractor -> spikeinterface/extractors/neoextractors/plexon2.py -> spikeinterface/extractors/neoextractors/neobaseextractor.py line 218 that "stream_id 3 is not in []". Investigating.

This seems to have been resolved in neuroconv 0.6.2 https://github.com/catalystneuro/neuroconv/pull/1058. This could also be resolved by limiting neo version to

Installing neuroconv 0.6.2 from pypi does not install its extras (see https://github.com/catalystneuro/neuroconv/issues/1116). This is fixed in neuroconv 0.6.5. So I think it would be best to punt PL2 support to...

Hi @benbrinkmann . Sorry you received this error. I can reproduce the error on my end. Unfortunately this cannot be resolved on your end - pyedflib needs to be packaged...

This appears to be resolved in the main branch, presumably with the update to Python 3.12 and NeuroConv 0.6.0. I'm working on a release next week and will ping back...