Ray Stefancsik

Results 115 comments of Ray Stefancsik

> @rays22 mind helping me? @megbalk , Do you need me as a reviewer of this PR?

The word 1. `muscle` can mean a type of tissue. Alternatively, the word 2. `muscle` is used in a broader sense: an anatomical/physiological unit composed of contractile and other tissues,...

> * [ ] "Roll back": We go to @rays22 original list of taxon constraints, and remove them using robot unmerge, and instead add a "never_in_euroglires" subset tag on them....

[UBERON:0000045 ganglion](https://www.ebi.ac.uk/ols/ontologies/uberon/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FUBERON_0000045) is currently defined as a subclass of [UBERON:0010001 cell cluster organ](https://www.ebi.ac.uk/ols/ontologies/uberon/terms?iri=http://purl.obolibrary.org/obo/UBERON_0010001). Maybe re-defining [UBERON:0000045 ganglion](https://www.ebi.ac.uk/ols/ontologies/uberon/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FUBERON_0000045) as a subclass of [UBERON:0005162 multi-cell-part structure](https://www.ebi.ac.uk/ols/ontologies/uberon/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FUBERON_0005162) instead of being the subclass of...

I think this is the part of the logical definition of [CARO:0001000 multi-cell-part structure](https://www.ebi.ac.uk/ols/ontologies/caro/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCARO_0001000) that causes/will cause disjointness problems in UBERON by being too restrictive: ``` Subclass of: 'connected anatomical...

Consider obsoleting 'ictal' PATO:0001913. Consider using 'seizure'.

Another related phenotype pattern: https://github.com/obophenotype/upheno/issues/825

Related ticket: #173 .

Related ticket #481 .