Ray Stefancsik
Ray Stefancsik
### 1. Vulvar hemangioma * As a short term solution, I suggest the following EQ to define [HP:0410272 Vulvar hemangioma](https://www.ebi.ac.uk/ols4/ontologies/hp/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FHP_0410272?lang=en): ``` Hemangioma and ('characteristic of part of' some 'external female...
> Suggestion to change EQ to "'has part' some ('increased amount' and 'characteristic of' some 'white adipose tissue' and has modifier some abnormal) @LCCarmody , your suggested revision looks fine...
> @rays22 can we touch bases about this? Yes. Sorry for my delayed response @pnrobinson. Would you like me to set up a call?
I am fine with using either Incomplete structure (PATO:0005013) or a newly created PATO incompletely partitioned quality in the EQ. Let me know if I should create a term request...
Hi @LCCarmody , Here is [a PR](https://github.com/obophenotype/human-phenotype-ontology/pull/10631) that is intended to import `PATO:0005013 incomplete structure` into HP.
I have made a ticket in Uberon to reconsider the partonomy of the tongue and the oral cavity, which could potentially fix the inference issues with [HP:3000076 Abnormality of lingual...
> Probably mouth is not part of face and the face stops at the vermilion border! Need to figure out a better placement. 1. I can confirm that [UBERON:0000165 mouth](http://purl.obolibrary.org/obo/UBERON_0000165)...
> > 1. I can confirm that [UBERON:0000165 mouth](http://purl.obolibrary.org/obo/UBERON_0000165) is not part of [UBERON:0001456 face](http://purl.obolibrary.org/obo/UBERON_0001456). Revising the HPO subclass assertion that an `Abnormality of the mouth` is an `Abnormality of...
This is to [summarise some of the 'part of' and 'has part' relationships in Uberon resulting from Uberon issue #3311.](https://github.com/obophenotype/uberon/issues/3311) * The [lingual tonsil](http://purl.obolibrary.org/obo/UBERON_0007250) is no longer part of the...
It seems that the genitourinary system is thought to be a superset of the reproductive and renal systems in HP. In contrast, in Uberon the [genitourinary system](https://www.ebi.ac.uk/ols/ontologies/uberon/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FUBERON_0004122) includes only the...