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Qiita - A multi-omics databasing effort

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After hitting an error part way through running `qiita-env make --no-load-ontologies` on a clean qiita install (because the `redis-server` call hadn't been made), I got the (expected) error telling me...

The Link to Qiimp in https://qiita.ucsd.edu/static/doc/html/gettingstartedguide/index.html#sample-information-file is broken in the paragraph `tab located at the top of the page is a useful tool for creating Qiita and EBI compatible metadata...

_Originally posted by @wasade in https://github.com/qiita-spots/qiita/pull/3284#discussion_r1191758003_

Currently, when calculating the "Merging scheme" of artifacts Qiita uses the full value of the parameters and it would be more user friendly if we only used the filename (vs....

The user should be able to select via a dropdown the available metadata columns in a given analysis. Currently, they have to type it. cc: @rob-knight.

When running a new meta-analysis, I'd like to be able to import the workflow from an existing analysis. This would be really helpful for example when needing to re-run an...

The original code, see below, assumes that `qc.working_dir` and `qc.base_data_dir` have the same "root", so when they don't it creates a "weird" base. This happened in qiita-rc: ('/a/b/working_directory/', '/c/d/'), repestibly....

Currently, you can only delete samples in the study/sample selection within an analysis creation page; it will be great if we could just have checkboxes to include or not those...

It would be really cool if Qiita constructed new database-wide PCoAs on a nightly basis, and exposed the resulting .qzvs on the stats page. There are a few perspectives that...

For Sample Validation function (cross-check wetlab sample IDs with metadata in Qiita), it would be great to add a button to export a .csv file that contains the information given...