pgaudet
pgaudet
GORULE:0000013 states: Experimental annotations (1) failing the taxon constraints are reported in the error reports but unchanged; non-experimental annotations (2) are filtered out of the pipeline products. (1) EXP evidence...
[gorule-0000027 ](https://github.com/geneontology/go-site/blob/master/metadata/rules/gorule-0000027.md) states that all identifiers must be valid, but this is vague. We will first check **Column 1 & 2: entity** - [x] **DB (GAF column 1)** value should...
**Old rule:** IBA annotations should ONLY be assigned_by GO_Central and have PMID:21873635 as a reference **Updated to:** "IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference
P2GO rule
Email reminder should be sent to each group about 2 weeks before the next release
Hello, @alexsign reported that some 'with' data in the exported Noctua GPADs contain "MGI" rather than "MGI:MGI". https://github.com/geneontology/go-site/blob/master/metadata/rules/gorule-0000027.md mentions that all db preixes should be found in the [dbxref file](https://github.com/geneontology/go-site/blob/master/metadata/db-xrefs.yaml)...
Using the PMID for PAINT is not clear to many groups, so I have restored GOREF_0000033 and updated it > The Phylogenetic ANnotation using Gene Ontology (PAN-GO) method annotates evolutionary...
Hello, Right now we have 2 types of do not annotate flags: do_not_annotate, with 135 terms do_not_manually_annotate, with 72 terms 1) Do we need that distinction anymore? 2) I would...
Hello, There is a new rule that would forbid NOT annotations with extensions. Most annotations are from MGI @ukemi https://docs.google.com/spreadsheets/d/172dNbAfDDGa11-inan_yQQPt6hONDPtwtigFxmPHra4/edit#gid=0 Can you have a look and see if that new...