pgaudet

Review annotations to GO:0040031 snRNA modification

This is to check annotations to confirm that we can rename terms to L-leucine xx. GO:0071233 | cellular response to leucine GO:0070728 | leucine binding GO:0009098 | leucine biosynthetic process...

Review annotations to GO:0015248 sterol transporter activity

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https://docs.google.com/spreadsheets/d/1fdH3NsL7kCEmxQcFP2YmgtJDbmEVCnNunBHUC7gMElw/edit#gid=0 Group | Number of EXP -- | -- CGD | 1 SGD | 9 UniProt | 1 WB | 1

Dear all, The proposal has been made to obsolete - GO:1902295 synthesis of RNA primer involved in cell cycle DNA replication - GO:1902330 synthesis of RNA primer involved in bacterial-type...

"Interacting species" should be captured as an extension with the "has input" relation

12

Hello, For annotations to children of GO:0044419 interspecies interaction between organisms, we now recommend to start migrating away from using the 'interacting taxon' field of GAF/GPAD, and instead use an...

Review annotations to GO:0044218 other organism cell membrane

2

Hello, The proposal has been made to obsolete GO:0044218 other organism cell membrane. Please review your annotations and rehouse if appropriate: https://docs.google.com/spreadsheets/d/1NZ6-lK_X4XuzL4ScQ-RclPIm5xcQI8jW2S0wGBp9cms/edit#gid=0 Impacted groups ---- CAFA: 2 annotations UniProt: 12...

Review annotations to activity involved in x - transporters - second batch

2

GO:0086060 voltage-gated sodium channel activity involved in AV node cell action potential GO:0086062 voltage-gated sodium channel activity involved in Purkinje myocyte action potential GO:0086063 voltage-gated sodium channel activity involved in...

NCBI Linkout to contact authors to review annotations from their papers.

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Review whether necessary infrastructure is in place. Discussion: we could also use other mechanisms -

Documentation - MOD pipelines

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We need MODs to (1) document their pipeline and (2) promote the file available from GO as the file to download instead of the MOD specific file

Change sources: Human, chicken, dog, pig, cow files

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Hello, @alexsign /GOA is now producing 'combined' files for Human, chichen, dog, pig, cow files, containing all Swiss-Prot isoforms, (_not_ the TrEMBL isoforms), complexes, and RNAs. The links are here:...