cobratoolbox
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opencobra
The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:
Path handling in initCobraToolbox is updated. **I hereby confirm that I have:** - [X] Tested my code on my own machine - [X] Followed the guidelines in the [Contributing Guide](https://opencobra.github.io/cobratoolbox/docs/contributing.html)...
I want to learn to use this package for rate-related calculations, in the official documentation of the function section, rate-related functions clicked on the display of the 404, I do...
printRxnFormula had an update for duplicated rxnIDs. The update however made it so that the iteration became the index being extracted from the S-matrix instead of the index belonging the...
Within part 2 of mgPipe, fastSetupCreator creates a model without the fields "citations" and "comments" which createPersonalizedModel tries to remove, causing an error. I have worked around this by creating...
Hello, This is only an observation and question regarding the expectation of master/head to successfully compile with `mcc`. I've started trying to compile cobratoolbox with with a matlab app. The...
Update to metanetxMapper code Update to optimizeCardinality Error function in MATLAB breaks code execution, therefore any operation after that would not be executed. There is also no need for a...
*Please include a short description of enhancement here* Added a design tool called optEnvelope: https://doi.org/10.1371/journal.pone.0294313 Added a test for optEnvelope **I hereby confirm that I have:** - [X] Tested my...
*Please include a short description of enhancement here* **I hereby confirm that I have:** - [ ] Tested my code on my own machine - [ ] Followed the guidelines...
debug_testall **I hereby confirm that I have:** - [X] Tested my code on my own machine - [ ] Followed the guidelines in the [Contributing Guide](https://opencobra.github.io/cobratoolbox/docs/contributing.html) - [X] Selected `develop`...
*When I run the initCobraToolbox command, I receive the following warning: Warning: Directory access failed: D:\matlab 2017b\toolbox\cobratoolbox-master\cobratoolbox-master\src\analysis\thermo\vonbertalanffy\initVonBertalanffy.m In path (line 109) In addpath (line 94) In initCobraToolbox (line 698)* I...
