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## PR checklist Closes #4471 - [ ] This comment contains a description of changes (with reason). - [ ] If you've fixed a bug or added code that should...

karthikram-takara

Nv/2978 update index handling

1

## PR checklist Closes #XXX - [ ] This comment contains a description of changes (with reason). - [ ] If you've fixed a bug or added code that should...

vucka

4451 add vcf2maf nf test

10

## PR checklist Closes [#4451](https://github.com/nf-core/modules/issues/4451) - [x] This comment contains a description of changes (with reason). - [x] If you've fixed a bug or added code that should be tested,...

stevekm

Add new module vgan/haplocart

23

## PR checklist New Module vgan/Haplocart Closes #2152 - [ X] This comment contains a description of changes (with reason). - [ X] If you've fixed a bug or added...

JoshuaDanielRubin

Add modkit pileup

1

## PR checklist Closes #3950 - [x ] This comment contains a description of changes (with reason). - [ x] If you've fixed a bug or added code that should...

Michal-Babins

4445 bbmap pytest to nf test

2

## PR checklist Contributes to https://github.com/nf-core/modules/issues/4445, but only one subtool for now (bbduk). Pytest removed and ported to nf-test. - [x] This comment contains a description of changes (with reason)....

tfalkarkea

adding chewbbaca/createschema module

6

## PR checklist Closes #4480 - [-] This comment contains a description of changes (with reason). - [-] If you've fixed a bug or added code that should be tested,...

anwarMZ

Pbtk bam2fastq

2

## PR checklist - [x] This comment contains a description of changes (with reason). - [x] If you've fixed a bug or added code that should be tested, add tests!...

mbeavitt

add --target-file argument

1

Adding the `--target-file` argument requires an extra input to this module - a `bed` file. This commit adds the `bed` file input to the module.

wikiselev

Unicycler nftest

9

## PR checklist Adds nf-test for unicycler module.

FloWuenne