mixcr
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milaboratory
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
depends on server localization ? e.g. ``` Clone ID Clone count Clone fraction Clonal sequence(s) Clonal sequence quality(s) All V hits All D hits All J hits All C hits...
By 2.2 we should came up with some **standard**, easy-parseable output for alignments and clones. No more additional pre-processing of anchor points, alignments, hits, etc.. Something maximally simple, but containing...
In all actions with `-O` style parameters: - align - assemble - assemblePartial
See. CloneFactory.create() (~ line 115)
After https://github.com/milaboratory/milib/issues/36
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MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.