mixcr
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Different separator for segment alignment score
depends on server localization ? e.g.
Clone ID Clone count Clone fraction Clonal sequence(s) Clonal sequence quality(s) All V hits All D hits All J hits All C hits All V alignments All D alignments All J alignments All C alignments N. Seq. FR1 Min. qual. FR1 N. Seq. CDR1 Min. qual. CDR1 N. Seq. FR2 Min. qual. FR2 N. Seq. CDR2 Min. qual. CDR2 N. Seq. FR3 Min. qual. FR3 N. Seq. CDR3 Min. qual. CDR3 N. Seq. FR4 Min. qual. FR4 AA. Seq. FR1 AA. Seq. CDR1 AA. Seq. FR2 AA. Seq. CDR2 AA. Seq. FR3 AA. Seq. CDR3 AA. Seq. FR4 Ref. points
0 36 0.00153302388962228 TGCGCCAGCAGCTTGCTGGGCGGGGATCTAGCTTTCTTT IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII TRBV5-1*00(245.6) TRBD1*00(25).TRBD2*00(25) TRBJ1-1*00(185) 270|285|306|0|15||75.0 20|25|36|17|22||25.0;23|28|48|19|24||25.0 30|40|68|29|39||50.0 TGCGCCAGCAGCTTGCTGGGCGGGGATCTAGCTTTCTTT 40 CASSLLGGDLAFF :::::::::0::15:17::21:22:29::39:::
or
Clone ID Clone count Clone fraction Clonal sequence(s) Clonal sequence quality(s) All V hits All D hits All J hits All C hits All V alignments All D alignments All J alignments All C alignments N. Seq. FR1 Min. qual. FR1 N. Seq. CDR1 Min. qual. CDR1 N. Seq. FR2 Min. qual. FR2 N. Seq. CDR2 Min. qual. CDR2 N. Seq. FR3 Min. qual. FR3 N. Seq. CDR3 Min. qual. CDR3 N. Seq. FR4 Min. qual. FR4 AA. Seq. FR1 AA. Seq. CDR1 AA. Seq. FR2 AA. Seq. CDR2 AA. Seq. FR3 AA. Seq. CDR3 AA. Seq. FR4 Ref. points
0 188 0.004346921316099794 TGTGCCATCAGTGAGTCGATTCCCACAGGCAGCACTGAAGCTTTCTTT IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII TRBV10-3*00(220,9) TRBD1*00(25) TRBJ1-1*00(214,9) 270|292|307|0|22|SC289T|96.0 15|20|36|24|29||25.0 24|40|68|32|48||80.0 TGTGCCATCAGTGAGTCGATTCCCACAGGCAGCACTGAAGCTTTCTTT 40 CAISESIPTGSTEAFF :::::::::0:17:22:24:::29:32::48:::
MiXCR v2.0.2
Computer 1 - Windows Computer 2 - Ubuntu
Moved to major 2.2 because changes output format.