Eric Deutsch
Eric Deutsch
oof, thanks. Yeah, I think we should put some effort into slimming down the response first somehow. And then maybe something on the front end.
back end now supports max_synonyms=N in a POSTed dict.
Fixed in `master` by limiting the number of nodes. Although I now belatedly wonder if that was really the right way to fix it. What if I really want to...
Does it make sense to limit the number of paths (analyses) on the back end? or should the back end send them all and the UI should discard more than...
We might also check out the Robokop interface to see if we like some of the ideas there: https://robokop.renci.org/
`master` is deployed to all endpoints on arax.ncats.io. The new Pathfinder question appears to be visible. Although, strangely instead of many results, there is only 1 result. With many analyses....
ah okay, thanks @mohsenht , I missed that while I was traveling. This is a surprising turn.
I suggest test queries 1 and 3 from here: https://docs.google.com/spreadsheets/d/1O_H8DoqaOoYiaiNG_LHZNnw9F8I8c3T5/edit?gid=1365602365#gid=1365602365
In principle UniProtKB does contain such information: https://www.uniprot.org/uniprotkb/P05067/entry#disease_variants
maybe because the predicate in RTX-KG2 got switched to biolink:treats_or_applied_or_studied_to_treat ?