Eric Deutsch

outstanding, thanks! The new results look excellent! But I confess I don't understand what it means that 'creative expand' edge support graphs should be excluded from ranking.

okay, thanks for the explanation. I think I get it mostly, although I am thinking that the weight of the `treats [sg]` edge should be influenced by the contents of...

Yes, that's correct. I think in our 6 million nodes the vast majority will never appear in a query and I think we can ignore for a first attempt at...

That is an interesting question for the FastNGDers (@finnagin @amykglen ?) of the 6.1 million nodes in KG2.5.2C, how many have at least one PMID associated with it in our...

I have some fanatical programming friends who insist that the smallest possible program that can still do the job is the best one. I wonder if some element of this...

of course on the flip side, one could argue that those are exactly the kind of nodes that we *want* to look for edges for. So that they become connected!...

I'm thinking it would be sensible to try a small-scale experiment to see if the approach yields useful results before starting thousands of hours of computation . Is there already...

Agreed, and I also think that looking at a few examples would be useful. Example 1: MONDO:0013989 ``` { "edges": { "e00": { "subject": "n00", "object": "n01" } }, "nodes":...

@chunyuma would you generate the histogram with 0.01 NGD score resolution?

> For some reasons, UniProtKB:P78508 and UniProtKB:Q9NS40 are not in curie_to_pmids_v1.0_KG2.6.3.sqlite database. I guess probably ARAX is still using the old version of kg2 rather than 2.6.3. ARAX is still...