Daniel Baker

I understand! Take your time. I'm just happy to take advantage of your hard work. I think it's exciting to see kernel methods, dimensionality reduction, neural network acceleration and locality-sensitive...

Primarily variations on random projections for kernel applications, building on Choromanski et al.'s and Smola's work. Your "Practical and optimal LSH for angular distance" is cited in most of Choromanski's...

Hi Joel, Thanks for this issue! I was able to reproduce it with gcc-13, and it was a quick fix. I've merged it in [here](https://github.com/dnbaker/dashing2/pull/78). Happy to help with any...

Hi Jianshu - Thanks for asking! Sorry it's been so long. That's something that's definitely possible. I'll see if I can work on it in the next week. Take care,...

It varies by the task at hand. The raw comparison speed of bindash's packed sketches is very fast because they can terminate their loop early, and bindash is an excellent...

May I have the full command you're using? Any additional information you could provide would be helpful as well. In the default all-pairs mode, memory is allocated in a few...

Thank you! This is a big help. There's one other place memory is used in `--parse-by-seq` mode: storing the sequences of each read. What's happening here is that the whole...

Checking back in - this is improved with https://github.com/dnbaker/dashing2/pull/81. I'm rebuilding v2.1.18 binaries currently and will update you when they're ready. Memory usage should be a ower for --parse-by-seq mode....

Hi Joel - Thanks for the report! I was able to reproduce the issue, and some tweaks to the Makefile solved it. I've bumped the version to 0.5.1. I appreciate...

Hi Jianshu - Interesting. Yes, you can collapse them together. A lot depends on if the two ends overlap with each other. You can safely concatenate the sequences with an...