Daniel Baker

Your options are to add the folder the Dashing executable is in to your $PATH variable, or copy the executable into a folder that is in your path, such as...

Hi, Sure, you can do that. You'd start with a distance or similarity matrix, and then feed that into a hierarchical clustering algorithm. Good options could include scipy's hierarchical clustering...

Hi, @tsp-kucbd! Thanks for making this issue. I'll investigate this and get you a fix + updated binaries as soon as I can. Best, Daniel

Hi again, I have a potential fix `dev` branch, and I'll have working binaries for the v0.5.5 release tomorrow. Thanks for pointing this out, and I hope this solves the...

Thanks for pointing this out for asymmetric comparisons. I've corrected this in the current [dev branch](https://github.com/dnbaker/dashing/tree/dev), from which you could build from source now or wait for the next release...

You're right! I've uploaded [another version](https://github.com/dnbaker/dashing/releases/tag/v0.5.5) overwriting the old v0.5.5, and it should produce some results that look like this: ``` ./dashing_s256 dist -T bonsai/test/*.fna.gz Dashing version: v0.5.5-4-gb11d #Path Size...

Hi! Sure, that's something that can be done. I'm in the process of adding an option `-o` to sketch that can take '/dev/stdout' or '-', which I'll probably finish later...

Hi Mihkel -- They can't be compared directly, but you can compress larger sketches by folding them in half repeatedly, if you will. I've added a new subcommand `dashing fold`...

Sure! It's really easy with Numpy. Here's a script that does what you need: ``` import numpy as np def parse_binary(path): dat = np.fromfile(path, dtype=np.uint8) assert dat[0] == 0, "Expected...

Hi Ahmad, Thanks for checking in on this, but I suspect you're running into something a little interesting: both the numerator and the denominator are changing as a function of...