RNA-Bloom

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reduce redundancy in direct RNA long-read only assembly?

1

Hello, I used rnabloom to construct a transcriptome from direct RNA data with the following: rnabloom -long all_reads.fastq -stranded -t 25 -outdir dir/ -u true The rnabloom.transcripts.fa assembly file seems...

mjudd8

Consensus transcriptome de novo with multiple samples

1

I'm reaching out regarding an issue I encountered while using RNA-bloom version 2.0.1 in conjunction with JDK17. Specifically, I'm attempting to generate a de novo assembly using 32 samples of...

nriareal