gene-network topic

List gene-network repositories

MomentClosure.jl

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Tools to generate and study moment equations for any chemical reaction network using various moment closure approximations

FiniteStateProjection.jl

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Finite State Projection algorithms for chemical reaction networks

SJARACNe

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Scalable Tool for Gene Network Reverse Engineering

DelaySSAToolkit.jl

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DelaySSAToolkit.jl: a tool in Julia for stochastic simulation with delays

scRank

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A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gene regulatory network (tpGRN) for single-cell transcriptomic dat...