jbrowse
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GMOD
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
Trying to load the genbank record from https://www.ncbi.nlm.nih.gov/nuccore/MT118835.1?report=graph does not work because it does not contain mRNA
There's an emerging standard for adding CITATION files to the root of a project to encourage academic citations. We should add one to JB1. Format spec: https://citation-file-format.github.io/
Hi, Would it be possible to add the ability to step to the previous/next variant in a VCF track? This follows on from the 'show PASS' ticket I submitted last...
This might be more of a jbrowse issue so please move it there if that makes more sense. When loading a track with an unknown track type, jbrowse crashes and...
hi I’m trying to browse our data on a mobile device (iPhone), I’ve tried using both chrome and safari. I can’t work out how to make the categories wider so...
On a mobile, I am unable to open the menu (down arrow right hand side of track) I also cannot close tracks using the x I am able to drag...
Could the ability to optionally show the reference sequence of deleted regions of reads rather than `*` be added? Thanks
Hi, In recent JBrowse version (1.15.x, 1.16), to add a plugin we have to run setup.sh to rebuild all the js stuff. In older version it was possible to add...
I've just encountered (and luckily solved) a servious bug related with `.htaccess`: In order to make my website faster (using apache, including JBrowse and other situations), I use gzip compressing...
I think it is worth probably restarting uploads of the jbrowse-dev.zip release to github releases as it's absense causes confusion to those who arrive straight to the github releases stream