jbrowse

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cmdcolin

cmdcolin

grouped track autoscaling

12

That's a good point. A more powerful version of this idea would probably be to have a way to group tracks that should all autoscale together, based on them being...

rbuels

Using autoscale local, but having pos_color and neg_color relative to global mean

6

I am using Jbrowse version 1.16.9 to create my Genome Browser. I have multiple XYplots in which I am using `autoscale:local`. This is an important feature or for me, as...

Jungal10

https://www.npmjs.com/package/@gmod/jbrowse stuck on 1.16.6

cmdcolin

Trying to import Browser from '@gmod/jbrowse' Does not necessarily work, the main export is not correct it refers to browser/main.js (electron) Then there are a couple other crutches such as...

cmdcolin

Find way to merge arrays in config without "overwriting elements"

2

There are some scenarios where if you try to define an array of things in the config then it can overwrite existing defaults. Technically it's not "overwriting" actually, but mixing...

cmdcolin

Feature Request: support loading psl and/or bed12 tracks

2

support loading psl and/or bed12 tracks

malcook

Make SNPCoverage track support different source data

2

I like that SNPCoverage tracks convey information about both coverage as well as the number of mismatches for any given position. However, rendering all this info directly from a BAM...

nathanhaigh

BED file with strand '.' being converted to strand -1

1

Example file ``` NbV1Ch01 18776453 18777002 MACS2_peak_1486 34 . 2.35549 5.48617 3.42439 437 ```

cmdcolin