SCEVAN

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T-cell recognized as tumor cells

4

I am testing SCEVAN for stratifying malignant cells in CD45 sorted dataset, i.e., up to a certain limit, I am confident about the cells' status (malignant versus normals). On that...

oandrefonseca

Heatmap values ordered by cluster

1

Hi, I have been using SCEVAN to annotate tumor samples and I was wondering if there is a way to plot the heatmap values ordered by cluster number (e.g. leiden...

karlacat1

count_mtx choose for integrated Seurat object data

1

Hi! I am using SCEVAN to analyze an integrated Seurat object. I have no idea which count_mtx data should I choose from my Seurat object. There are three versions: RNA,...

Lawwwwo

The fibroblast, EC, and myofibroblasts were also identified as tumor. What are the reasons for this result?

4

I'm using SCEVAN to analyze a tumor sample. However, when I use the total cells as input. The result is very strange.    The marker is shown in...

gloriafight

[solved]deal with memory(RAM)

2

I ran 10 single-cell samples together using SCEVAN, but the program exceeded the available memory on our server (which has 1200 GB of memory). Can you please check if I...

seoyounglee6445

Good day, I like how accurate and fast the tool is! The pipeline assigns which cells are likely to be normal and which are malignant. I would like to know...

ccruizm