subclone-identification topic

List subclone-identification repositories

SCEVAN

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R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of mali...

ccube

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Bayesian mixture models for estimating and clustering cancer cell fractions

mobster

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Model-based subclonal deconvolution from bulk sequencing.