variation-graphs topic

List variation-graphs repositories

StrainFLAIR

25
Stars
5
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Strain-level abundances estimation in metagenomic samples using variation graphs

rs-gfatovcf

16
Stars
1
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Rust implementation of Flavia95's GFAtoVCF

pancat

28
Stars
1
Forks
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Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions

PanAligner

34
Stars
4
Forks
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Long read aligner for cyclic and acyclic pangenome graphs