tcr-repertoire topic
List
tcr-repertoire repositories
immunarch
293
Stars
64
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🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
DeepTCR
112
Stars
40
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Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data
tcr
36
Stars
22
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[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.
CATT
18
Stars
4
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Watchers
An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.
nanoranger
16
Stars
4
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Watchers
simplified cellranger for long-read data