tcr-repertoire topic

List tcr-repertoire repositories

immunarch

293
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64
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🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires

DeepTCR

112
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40
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Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data

tcr

36
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22
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[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.

CATT

18
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4
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An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.

nanoranger

16
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4
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simplified cellranger for long-read data