tcr topic

List tcr repositories

awesome-vdj

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📚 Tools and databases for analyzing HLA and VDJ genes.

turbocookedrabbit

108
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20
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A user friendly RabbitMQ library written in Golang.

immunarch

293
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🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires

awesome-token-curated-registries

72
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Curated list of awesome Token Curated Registry (TCR) resources.

DeepTCR

112
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40
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Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data

immuneML

60
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immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.

stitchr

48
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Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info

substrate-tcr

47
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A Parity Substrate runtime implementation of a simple Token Curated Registry (TCR)

tcr-bert

41
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6
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Large language modeling applied to T-cell receptor (TCR) sequences.

tcr-workshop

39
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Information and instructions for trying TCR workflow (test && commit || revert)