tcga topic

Building classifiers using cancer transcriptomes across 33 different cancer-types

greenelab

Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

PoisonAlien

TCGAbiolinks

BioinformaticsFMRP

Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024

MarvinLer

:package: An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/

ropensci

Provide R access to the NCI Genomic Data Commons portal.

Bioconductor

Putting machine learning in the hands of cancer biologists

cognoma

BioBombe: Sequentially compressed gene expression features enhances biological signatures

greenelab

Bioconductor package for management of multi-assay data

waldronlab

Toolbox package for organizing and working with TCGA data

waldronlab