Anand Mayakonda

Results 5 repositories owned by Anand Mayakonda

maftools

423
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Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

TCGAmutations

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R data package for pre-compiled somatic mutations from TCGA cohorts (from Broad Firehose and TCGA MC3 Project)

trackplot

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Generate IGV style locus tracks from bigWig files in R

basegraphics

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Pretty plots using pure base graphics in R

somaticfreq

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knowledge-based genotyping of cancer hotspots from the tumor BAM files