radseq topic

List radseq repositories

assigner

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Population assignment analysis using R

radiator

57
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RADseq Data Exploration, Manipulation and Visualization using R

stackr

26
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stackr: an R package to run stacks software pipeline

assignPOP

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Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution. 2018;9:439–446.

scripts

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Random scripts, mostly for dealing with RADseq data and DNA sequence alignments

radseq

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Collection of Python scripts for parsing/analyses of RAD-seq data