pymol-plugin topic

PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.

pymodproject

A Consensus Docking Plugin for PyMOL

paiardin

Generate Boltzmann-weighted Sterimol Steric Parameters for Conformationally-Flexible Substituents

patonlab

PyMOL extension to color AlphaFold structures by confidence (pLDDT).

cbalbin-bio

A collection of PyMOL plugins to visualize atomic bonds.

rasbt

calculate chemical bond strength in solids, surfaces and molecules

smutao

A PyMOL plugin for visualizing vibrations in molecules and solids

smutao

The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websearches from within PyMOL as well as many other convienent functio...

MooersLab

Restraintmaker is a tool intended to build Position or Distance restraints for Molecular Dynamics simulations (or any other simulation technique with coordinate-based particles). It can be used on a s...

rinikerlab

A PyMOL Plugin for calculating docking box for LeDock, AutoDock and AutoDock Vina.

MengwuXiao