population-genetics topic

An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.

royfrancis

An analysis and visualization platform for 'omics data

merenlab

An open-source toolkit for large-scale genomic analysis

projectglow

Tools to work with variant call format files

knausb

Implementation of the Pairwise Sequentially Markovian Coalescent (PSMC) model

lh3

A fully reproducible and state-of-the-art ancient DNA analysis pipeline

nf-core

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

chasewnelson

PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

bacpop

VCF2Dis: A new simple and efficient software to calculate p-distance matrix based Variant Call Format

BGI-shenzhen

🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction

grunwaldlab